Enum: ExperimentalContextEnum

Context describing experimental design.

URI: enigma:ExperimentalContextEnum

Permissible Values

Value	Meaning	Description
series_type	None	Context describing the purpose of a series
condition	None	A human-readable description of an experimental condition
method	None	A description of one or more methods used in an experiment
algorithm_parameter	None	A description of one or more algorithm parameters
date	None	A date, formatted as YYYY-MM-DD
time	None	A time, formatted as HH:MM (see DateTime to include the date)
comment	None	A human-readable comment
instrument	None	A description of instrument(s) used
category	None	A human-readable description of a category
homogenized	None	Homogenized
anaerobic	None	Anaerobic
aerobic	None	Aerobic
undisturbed	None	Undisturbed
datetime	None	DateTime
time_zone	None	Time Zone, e
description	None	Description
link	None	Link to other data, e
experimental_process	None	Category of experimental process used to create a dataset
person	None	Name of a person
campaign	None	Campaign
input	None	Input
output	None	Output
control	None	Control
replicate	None	Replicate
subsample	None	Subsample
protocol	None	Protocol
availability	None	Boolean property indicating whether something is available
ionization_mode	None	Ionization mode used in a mass spec experiment
usability	None	Usability
barcode	None	Barcode
microplate_name	None	Microplate Name
microplate_well_name	None	Microplate Well Name
microplate	None	Microplate
publication	None	Publication
database	None	Database
obsolete	None	Obsolete
index	None	Index
internal_standard	None	Internal Standard

Identifier and Mapping Information

Annotations

property	value
microtype	ME:0000002
microtype_data_type	oterm_ref

Schema Source

• from schema: https://w3id.org/enigma/enigma-cdm

LinkML Source

name: ExperimentalContextEnum
annotations:
  microtype:
    tag: microtype
    value: ME:0000002
  microtype_data_type:
    tag: microtype_data_type
    value: oterm_ref
description: Context describing experimental design.
from_schema: https://w3id.org/enigma/enigma-cdm
rank: 1000
permissible_values:
  series_type:
    text: series_type
    description: Context describing the purpose of a series.
    annotations:
      term:
        tag: term
        value: ME:0000003
    title: Series Type
  condition:
    text: condition
    description: A human-readable description of an experimental condition.
    annotations:
      term:
        tag: term
        value: ME:0000006
    title: Condition
  method:
    text: method
    description: A description of one or more methods used in an experiment.
    annotations:
      term:
        tag: term
        value: ME:0000007
    title: Method
  algorithm_parameter:
    text: algorithm_parameter
    description: A description of one or more algorithm parameters.
    annotations:
      term:
        tag: term
        value: ME:0000008
    title: Algorithm Parameter
  date:
    text: date
    description: A date, formatted as YYYY-MM-DD.
    annotations:
      term:
        tag: term
        value: ME:0000009
    title: Date
  time:
    text: time
    description: A time, formatted as HH:MM (see DateTime to include the date).
    annotations:
      term:
        tag: term
        value: ME:0000010
    title: Time
  comment:
    text: comment
    description: A human-readable comment.
    annotations:
      term:
        tag: term
        value: ME:0000011
    title: Comment
  instrument:
    text: instrument
    description: A description of instrument(s) used.
    annotations:
      term:
        tag: term
        value: ME:0000012
    title: Instrument
  category:
    text: category
    description: A human-readable description of a category.
    annotations:
      term:
        tag: term
        value: ME:0000013
    title: Category
  homogenized:
    text: homogenized
    description: Homogenized.
    annotations:
      term:
        tag: term
        value: ME:0000014
    title: Homogenized
  anaerobic:
    text: anaerobic
    description: Anaerobic.
    annotations:
      term:
        tag: term
        value: ME:0000015
    title: Anaerobic
  aerobic:
    text: aerobic
    description: Aerobic.
    annotations:
      term:
        tag: term
        value: ME:0000016
    title: Aerobic
  undisturbed:
    text: undisturbed
    description: Undisturbed.
    annotations:
      term:
        tag: term
        value: ME:0000017
    title: Undisturbed
  datetime:
    text: datetime
    description: DateTime.
    annotations:
      term:
        tag: term
        value: ME:0000180
    title: DateTime
  time_zone:
    text: time_zone
    description: Time Zone, e.g., PDT
    annotations:
      term:
        tag: term
        value: ME:0000201
    title: Time Zone
  description:
    text: description
    description: Description.
    annotations:
      term:
        tag: term
        value: ME:0000202
    title: Description
  link:
    text: link
    description: Link to other data, e.g., a DOI or URL.
    annotations:
      term:
        tag: term
        value: ME:0000203
    title: Link
  experimental_process:
    text: experimental_process
    description: Category of experimental process used to create a dataset.
    annotations:
      term:
        tag: term
        value: ME:0000204
    title: Experimental Process
  person:
    text: person
    description: Name of a person.  Note that ENIGMA people should be listed as 'ENIGMA
      personnel' instead.
    annotations:
      term:
        tag: term
        value: ME:0000205
    title: Person
  campaign:
    text: campaign
    description: Campaign.
    annotations:
      term:
        tag: term
        value: ME:0000206
    title: Campaign
  input:
    text: input
    description: Input.
    annotations:
      term:
        tag: term
        value: ME:0000207
    title: Input
  output:
    text: output
    description: Output.
    annotations:
      term:
        tag: term
        value: ME:0000208
    title: Output
  control:
    text: control
    description: Control.
    annotations:
      term:
        tag: term
        value: ME:0000283
    title: Control
  replicate:
    text: replicate
    description: Replicate.
    annotations:
      term:
        tag: term
        value: ME:0000286
    title: Replicate
  subsample:
    text: subsample
    description: Subsample.
    annotations:
      term:
        tag: term
        value: ME:0000289
    title: Subsample
  protocol:
    text: protocol
    description: Protocol.
    annotations:
      term:
        tag: term
        value: ME:0000327
    title: Protocol
  availability:
    text: availability
    description: Boolean property indicating whether something is available.
    annotations:
      term:
        tag: term
        value: ME:0000333
    title: Availability
  ionization_mode:
    text: ionization_mode
    description: Ionization mode used in a mass spec experiment.
    annotations:
      term:
        tag: term
        value: ME:0000385
    title: Ionization Mode
  usability:
    text: usability
    description: Usability.
    annotations:
      term:
        tag: term
        value: ME:0000388
    title: Usability
  barcode:
    text: barcode
    description: Barcode.
    annotations:
      term:
        tag: term
        value: ME:0000394
    title: Barcode
  microplate_name:
    text: microplate_name
    description: Microplate Name.
    annotations:
      term:
        tag: term
        value: ME:0000409
    title: Microplate Name
  microplate_well_name:
    text: microplate_well_name
    description: Microplate Well Name.
    annotations:
      term:
        tag: term
        value: ME:0000410
    title: Microplate Well Name
  microplate:
    text: microplate
    description: Microplate.
    annotations:
      term:
        tag: term
        value: ME:0000411
    title: Microplate
  publication:
    text: publication
    description: Publication.
    annotations:
      term:
        tag: term
        value: ME:0000432
    title: Publication
  database:
    text: database
    description: Database.
    annotations:
      term:
        tag: term
        value: ME:0000435
    title: Database
  obsolete:
    text: obsolete
    description: Obsolete.
    annotations:
      term:
        tag: term
        value: ME:0000436
    title: Obsolete
  index:
    text: index
    description: Index.
    annotations:
      term:
        tag: term
        value: ME:0000468
    title: Index
  internal_standard:
    text: internal_standard
    description: Internal Standard.
    annotations:
      term:
        tag: term
        value: ME:0000469
    title: Internal Standard